Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907464.1_cds_XP_016457597.1_51304
CDS Infomation

[gene=LOC107781411] [db_xref=GeneID:107781411] [protein=uncharacterized protein LOC107781411 isoform X2] [protein_id=XP_016457597.1] [location=complement(join(32281..32394,32901..32963,33053..33150,33223..33294,33415..33610,33683..33773,33872..33927,34045..34162,34799..34923,35010..35230,35313..35601,35704..35831,37104..37173,37255..37353,37454..37657,37757..38095,38953..39409,40211..40286,41199..41302,41394..41395))] [gbkey=CDS]
Sequence

ATGTATGTTGGAGATGAATATGGAACAATCTCAGTTTTGAAGTTCTGTGTTGAGAACAGA
GAGCTTCTGCAACTGCCATATCAGATCTTGTGGAGTTCTCTTTCTGAAGCAGCTGGTTTT
GCGAATTCAGATCATCAACCAGTTGTTGGAATTCTCCCCCAACCTTTTACGTCAGGAAAT
AGATTATTGATTGCATATGAGAGTGGTTTAATTATACTATGGGACGTCGTTGAAGCCCAT
GTTATCATTGTTAAAGGTGATAAAGATCTCCATTTGAAGGATGGTGCTGTAAACTTTAGA
AAGAATGCAGATTCCAGCTCTCCTGATGATTTATTGAAGCATGAATTTGAGGAGAAAGAG
ATAACCACACTTTGCTGGGCATCCACTGATGGATCCGTTCTTGCTGTTGGGTACATAGAT
GGAGATATTCTGTTTTGGAAAACATCAAAATCAACCTTAAGCAAAGGTCAAGAAGCTGGA
CCATTTGATAATGTTGTTAAGCTACAGTTGTCTTCTGCTGAAAAAAGGCTTCCTGTCATT
GTCTTACACTGGTGGGCGAACAGTAAATCCCGGAATAGCAGCGATGGCCATCTTCTCATT
TATGGCGGTGATGAAATAGGATCCGATGAAGTCATTACGATTCTTACCCTTGATTGGTCA
TCTGGAATGGAGACTTTGAAATGTGTTGGTCGTGTTGACCTCACTCTTAGTGGCTCATTT
GCCGATACGATCTTATTACCAACTACCGGGACAGCAGCAACTGATGAAAAAGCTGCTTTA
TTTGTGTTGATGAGTCCTGGACAACTAAAACTTTTTGATTGTTCAAGCTTGTCTGACTTG
GTATCCAAAGAGTTGAAGAAAATATCTCTATCAGCTGAGGATTTTCCTGTAGAATTACCG
ACAGTTGATCCTTCCATGACTGTGACAAAGCTTACACAGTTGCATTCAGATGGAAACTTA
CCCGAGCCTCTTCAAGAGACACCTTTATTCAAGAAGTTTTGCGCAGCAACATCATCTGGG
GCTAACGGATGGCCCTTGACTGGAGGGGTGTATAATCATATTTCTCAAGCTGAGACTAAC
AGGATTCAAAGAGTTTATATAGCAGGTTATCAAGATGGATCTGTAAGGATGTGGGATGCC
ACTCATGCGGTTTTCCGTCTCCTTTGTGTTTTGGATAATGAGGTTAAAGGTGTAAATACT
GTTATATCAACTGCTTCAGTTTCAAAAATAGATTTCTGCTTCCAGACATTAAGATTGGCA
GTTGGGGATGAGTGTGGTCTGGTACGCCTTTATGATTTCAAACATAGCGATATGGAGAAC
TTCCATTTTATTACTGATGCTAAAAGTGAAGTTCATGAGTTGGCACAAGGTCAAGGACCT
AGCTGCAGAGCTGTTATAAAGCTTCTCGATGTTCGCGTCCGAGCGATCGAGTTTATAAAT
CATGGAGCCAAACTCGCAGTTGGATATGAAAATGTTAAGGTTGCAGTGCTTGATATGACT
TCATTATCAGTTTTGTTCTTGACAGACTCCGTATCTGTTGGTAGCTCTCCACTGGTCTCA
GTGATTGCAAAGAGATTTATGCATAGTGATGGTCATAGCAAAAGCCCAAAACAATCAGAG
CTTCCAGAAAACCATATGGAGGAACTCATGTTCGTTTTAACTGAGGATGCAAATATCTAT
GTAATTGATGGTGGTAGTGGTAAAACGTCCAGTTCAGAGCCCCTGCATTTAAAGAAAGCG
TCAACAGCAATTTCTATGTATGTCATAGAAAACAACACCCCATTTTCTGGTATAATAAGT
AAGAAGCCACAGTCCAGCAAGGGTGATGCAGATAGTAATGAGCCTTCACAGGACATGACC
ACTAGTGATCAATGTGATACGACTCCCTTTCTACAAAATGACCCCTCCAGGAAACACTTT
GAGGAGTCCTTTGTTATACTTTGCTGTAAAGATGCAATACGCACTTATGCTACAAGATCT
GTGGTTCATGGGGACAATAATTCTGCTTGCAAAGTGAAGCTCGACAAACCTTGTTGCTGG
ACAACTACTTTTATGAACGATGGGAAAGTTTGTGGGCTACTATTACTCTTTCAGAATGGA
GATATCGAGATTAGATCTTTGCCTGATCTAGAGTTGGTGGAGCAGACCTCCTTAATGTCA
GTTTTAAGGTGGAATTTCAAGCTAAATATGGACAGGGCGATGAGTTCCATGGAGAATGGC
CATGTTACCTTGGCAAATGGTTCTGAACTGGCTTTCGTGTCCCTATTAGCTAGTGAAAAT
GATTTCAGAATTCCAGAATCTTTGCCGTTTCTCCATGATGAAGTGCTCGCAGCTGCAGCA
GATGCTGCCATCAAATTCTCCACTCAGAAGAAGAAACAGGGTAGTGGGCCAAACATTATT
GGTACTCTCGTTAAAGGATTTAAAGTGGGAAAAACGAACCATAATATGGATCTCATCGAG
AGGTCTAAGTCAAACTTTAGTCATCTGGAAGGTATCTTTATGAAGAACCCACTCAACCCA
GAACCGTCCCCAACTATCAGTAAGGAAGTTCAAGGAGCAGTGGAGCTCGATATAGATGAT
ATTGAAATTGATGACCCTGTCCCTGTGGCTCCTACTTCATCTCATAGCACACAAAATAGT
AAAAGAGGAACTGAAAGAGGGAAGTTGCTTGATTCTGAGGGTGACGATGCCAAGCCCAGA
CTTAGGACACGTGAAGAAATCATAGCAAAATATAGAAAAGCTGGGGATGCATCATCAGCG
GCTGGAGAAGCTAGAAACAAGCTTCTAGAACGGCAAGAAAAACTTGAGAGAATTAGCCAA
AGAACTGACGAACTACGCAGTGAGGCGGAAGACTTTGCATCATTGGCAAATGAGCTTGTC
AAGGTAATGGAAAATCGCAATCGCAAATGGTGGCAAATATGA

Peptide Sequence

PEP ID

XP_016457597.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107781411 isoform X2 [Nicotiana tabacum]
Sequence

MYVGDEYGTISVLKFCVENRELLQLPYQILWSSLSEAAGFANSDHQPVVGILPQPFTSGN
RLLIAYESGLIILWDVVEAHVIIVKGDKDLHLKDGAVNFRKNADSSSPDDLLKHEFEEKE
ITTLCWASTDGSVLAVGYIDGDILFWKTSKSTLSKGQEAGPFDNVVKLQLSSAEKRLPVI
VLHWWANSKSRNSSDGHLLIYGGDEIGSDEVITILTLDWSSGMETLKCVGRVDLTLSGSF
ADTILLPTTGTAATDEKAALFVLMSPGQLKLFDCSSLSDLVSKELKKISLSAEDFPVELP
TVDPSMTVTKLTQLHSDGNLPEPLQETPLFKKFCAATSSGANGWPLTGGVYNHISQAETN
RIQRVYIAGYQDGSVRMWDATHAVFRLLCVLDNEVKGVNTVISTASVSKIDFCFQTLRLA
VGDECGLVRLYDFKHSDMENFHFITDAKSEVHELAQGQGPSCRAVIKLLDVRVRAIEFIN
HGAKLAVGYENVKVAVLDMTSLSVLFLTDSVSVGSSPLVSVIAKRFMHSDGHSKSPKQSE
LPENHMEELMFVLTEDANIYVIDGGSGKTSSSEPLHLKKASTAISMYVIENNTPFSGIIS
KKPQSSKGDADSNEPSQDMTTSDQCDTTPFLQNDPSRKHFEESFVILCCKDAIRTYATRS
VVHGDNNSACKVKLDKPCCWTTTFMNDGKVCGLLLLFQNGDIEIRSLPDLELVEQTSLMS
VLRWNFKLNMDRAMSSMENGHVTLANGSELAFVSLLASENDFRIPESLPFLHDEVLAAAA
DAAIKFSTQKKKQGSGPNIIGTLVKGFKVGKTNHNMDLIERSKSNFSHLEGIFMKNPLNP
EPSPTISKEVQGAVELDIDDIEIDDPVPVAPTSSHSTQNSKRGTERGKLLDSEGDDAKPR
LRTREEIIAKYRKAGDASSAAGEARNKLLERQEKLERISQRTDELRSEAEDFASLANELV
KVMENRNRKWWQI

Transcript Sequence

Gene sequence data has not been registered.